[All] Fwd: COVID-19 Biohackathon 2020 April 5-11

[Marco Cristancho]

Thanks Cath, very much appreciated, we will join the Biohackaton.

To date, Covid-19 isolates have been sequenced from México, Panama, Chile
and Brazil in LATAM https://nextstrain.org/ncov

Hoping to have a complete picture of evolution of this pathogen in LATAM in
the next few days.

My best wishes to all partners.

Marco



On Thu, Mar 19, 2020 at 4:42 AM Cath Brooksbank <cath at ebi.ac.uk> wrote:

> Dear all
>
> I hope you are all safe and well in these challenging times. Many of us
> want to contribute to efforts to understand and address the current
> COVID-19 pandemic. Here is one opportunity and I encourage those of you who
> are aware of others to post to this group; it would be super to have a
> strong LatAm contribution to global efforts to get this thing under control.
>
> Kindest regards
>
> Cath
>
> Begin forwarded message:
>
>
>
>
>
> Working groups/Topics:
> <https://github.com/virtual-biohackathons/covid-19-bh20/wiki>
>
>    - FAIR Data
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/FairData>
>    , Ontology
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/Ontology>
>    , Pangenome
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/Pangenome>
>    , Workflows
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/Workflows>
>    , Machine Learning
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/MachineLearning>
>    , Knowledge Graph
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/KnowledgeGraph>
>    , Text Mining
>
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/TextMining>Wikidata
>    et al.
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/Wikidata>
>    , Bio statistics
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/BioStatistics>
>    , Policy
>    <https://github.com/virtual-biohackathons/covid-19-bh20/wiki/Policy>
>
>
> [From the Biohackaton GitHub]:
>
> The goal of COVID-19-BH20 is to create a cohesive effort and work on
> tooling for COVID-19 analysis. The biohackathon will lead to more readily
> accessible data, protocols, detection kits, protein predictions etc. We
> will also push for policy change where it comes to non-public or hard to
> access data because we are facing such challenges!
> The biohackathon is about applying free and open source software on open
> data for scientific endeavour and biomedical progress.
>
>
> Wiki:  https://github.com/virtual-biohackathons/covid-19-bh20
>   -  to post ideas and form working groups.
>
> Mailing list:
>  https://groups.google.com/forum/#!forum/virtual-biohackathon  -  join
> without any obligation
>
> Share your name, affiliation and [topic/working group] interest at:
>
> https://docs.google.com/spreadsheets/d/1auS0C58W0KHuqPg7-qKzgO4QjvcXpRg2NxhPu9EcWfI
> <https://docs.google.com/spreadsheets/d/1auS0C58W0KHuqPg7-qKzgO4QjvcXpRg2NxhPu9EcWfI>
>
>         - fill in if you expect to be an (un)official participant.
>
>  Cheers,
>  Lynn
>
>
>
> Lynn M. Schriml, Ph.D.
> Associate Professor
> Institute for Genome Sciences
> University of Maryland
> School of Medicine
> Department of Epidemiology and Public Health
> 670 W. Baltimore St., Room 3061
> Baltimore, MD 21201
> P: 410-706-6776
> F: 410-706-6756
> lschriml at som.umaryland.edu
>
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> .
>
>
> --
> -------------------------------------------------------------
> Rob Finn
> Sequence Families Team Leader
> European Bioinformatics Institute (EMBL-EBI)
> Tel: +44 1223 492679
>
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